We have created a new R package called Copy-scAT (copy number inference using single-cell ATAC-seq data) to infer copy number genetic alterations using scATAC-seq data. When performing scATAC using ...

The Saint Louis University Genomics and Bioinformatics Core Facility provides state-of-the-art single-cell genomics and integrative bioinformatics services to both internal and external researchers.

This study presents a valuable tool named TSvelo, a computational framework for RNA velocity inference that models transcriptional regulation and gene-specific splicing. The evidence supporting the ...

Collect cells by centrifugation for 5 minutes at 1100 rpm, remove supernatant and dilute cells to a concentration of 1x106 cells/ml in fresh pre-warmed medium. Immediately transfer your cells to the ...